Assessing ecosystem isoprene emissions by hyperspectral remote sensing

Balzarolo M., Peñuelas J., Filella I., Portillo-Estrada M., Ceulemans R. (2018) Assessing ecosystem isoprene emissions by hyperspectral remote sensing. Remote Sensing. 10: 0-0.
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Doi: 10.3390/rs10071086

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This study examined the relationship between foliar isoprene emissions, light use efficiency and photochemical reflectance index (PRI) throughout the canopy profile and explored the contribution of xanthophyll cycle pigments versus other carotenoid pigments to the isoprene/PRI relationship. Foliar isoprene emissions within the canopy profile were measured in a high-density poplar plantation in Flanders (Belgium) during the 2016 growing season. The results confirmed that PRI was a promising estimator of isoprene emissions at canopy level. Interestingly, xanthophyll cycle pigments contributed more to isoprene biosynthesis than chlorophyll and drove the isoprene/PRI relationship. The simple independent pigment index and novel defined indices, such as the hyperspectral isoprene index and simple hyperspectral isoprene index, showed promising results and could be suitable estimators of isoprene emissions due to their strong relationship with the xanthophyll pool. © 2018 by the authors.

Llegeix més

Nutrient-rich plants emit a less intense blend of volatile isoprenoids

Fernández-Martínez M., Llusià J., Filella I., Niinemets Ü., Arneth A., Wright I.J., Loreto F., Peñuelas J. (2018) Nutrient-rich plants emit a less intense blend of volatile isoprenoids. New Phytologist. 220: 773-784.
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Doi: 10.1111/nph.14889

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The emission of isoprenoids (e.g. isoprene and monoterpenes) by plants plays an important defensive role against biotic and abiotic stresses. Little is known, however, about the functional traits linked to species-specific variability in the types and rates of isoprenoids emitted and about possible co-evolution of functional traits with isoprenoid emission type (isoprene emitter, monoterpene emitter or both). We combined data for isoprene and monoterpene emission rates per unit dry mass with key functional traits (foliar nitrogen (N) and phosphorus (P) concentrations, and leaf mass per area) and climate for 113 plant species, covering the boreal, wet temperate, Mediterranean and tropical biomes. Foliar N was positively correlated with isoprene emission, and foliar P was negatively correlated with both isoprene and monoterpene emission rate. Nonemitting plants generally had the highest nutrient concentrations, and those storing monoterpenes had the lowest concentrations. Our phylogenetic analyses found that the type of isoprenoid emission followed an adaptive, rather than a random model of evolution. Evolution of isoprenoids may be linked to nutrient availability. Foliar N and P are good predictors of the type of isoprenoid emission and the rate at which monoterpenes, and to a lesser extent isoprene, are emitted. © 2017 The Authors. New Phytologist © 2017 New Phytologist Trust

Llegeix més

A MODIS photochemical reflectance index (PRI) as an estimator of isoprene emissions in a temperate deciduous forest

Filella I., Zhang C., Seco R., Potosnak M., Guenther A., Karl T., Gamon J., Pallardy S., Gu L., Kim S., Balzarolo M., Fernandez-Martinez M., Penuelas J. (2018) A MODIS photochemical reflectance index (PRI) as an estimator of isoprene emissions in a temperate deciduous forest. Remote Sensing. 10: 0-0.
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Doi: 10.3390/rs10040557

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The quantification of isoprene and monoterpene emissions at the ecosystem level with available models and field measurements is not entirely satisfactory. Remote-sensing techniques can extend the spatial and temporal assessment of isoprenoid fluxes. Detecting the exchange of biogenic volatile organic compounds (BVOCs) using these techniques is, however, a very challenging goal. Recent evidence suggests that a simple remotely sensed index, the photochemical reflectance index (PRI), which is indicative of light-use efficiency, relative pigment levels and excess reducing power, is a good indirect estimator of foliar isoprenoid emissions. We tested the ability of PRI to assess isoprenoid fluxes in a temperate deciduous forest in central USA throughout the entire growing season and under moderate and extreme drought conditions. We compared PRI time series calculated with MODIS bands to isoprene emissions measured with eddy covariance. MODIS PRI was correlated with isoprene emissions for most of the season, until emissions peaked. MODIS PRI was also able to detect the timing of the annual peak of emissions, even when it was advanced in response to drought conditions. PRI is thus a promising index to estimate isoprene emissions when it is complemented by information on potential emission. It may also be used to further improve models of isoprene emission under drought and other stress conditions. Direct estimation of isoprene emission by PRI is, however, limited, because PRI estimates LUE, and the relationship between LUE and isoprene emissions can be modified by severe stress conditions. © 2018 by the authors.

Llegeix més

Characterisation of functional-trait dynamics at high spatial resolution in a mediterranean forest from sentinel-2 and ground-truth data

Schauman S., Verger A., Filella I., Peñuelas J. (2018) Characterisation of functional-trait dynamics at high spatial resolution in a mediterranean forest from sentinel-2 and ground-truth data. Remote Sensing. 10: 0-0.
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Doi: 10.3390/rs10121874

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The characterisation of functional-trait dynamics of vegetation from remotely sensed data complements the structural characterisation of ecosystems. In this study we characterised for the first time the spatial heterogeneity of the intra-annual dynamics of the fraction of absorbed photosynthetically active radiation (FAPAR) as a functional trait of the vegetation in Prades Mediterranean forest in Catalonia, Spain. FAPAR was derived from the Multispectral Instrument (MSI) on the Sentinel-2 satellite and validated by comparison with the ground measurements acquired in June 2017 at the annual peak of vegetation activity. The validation results showed that most of points were distributed along the 1:1 line, with no bias nor scattering: R2 = 0.93, p < 0.05; with a root mean square error of 0.03 FAPAR (4.3%). We classified the study area into nine vegetation groups with different dynamics of FAPAR using a methodology that is objective and repeatable over time. This functional classification based on the annual magnitude (FAPAR-M) and the seasonality (FAPAR-CV) from the data on one year (2016-2017) complements structural classifications. The internal heterogeneity of the FAPAR dynamics in each land-cover type is attributed to the environmental and to the specific species composition variability. A spatial autoregressive (SAR) model for the main type of land cover, evergreen holm oak forest (Quercus ilex), indicated that topographic aspect, slope, height, and the topographic aspect x slope interaction accounted for most of the spatial heterogeneity of the functional trait FAPAR-M, thus improving our understanding of the explanatory factors of the annual absorption of photosynthetically active radiation by the vegetation canopy for this ecosystem. © 2018 by the authors.

Llegeix més

β-Ocimene, a Key Floral and Foliar Volatile Involved in Multiple Interactions between Plants and Other Organisms

Farré-Armengol G., Filella I., Llusià J., Peñuelas J. (2017) β-Ocimene, a Key Floral and Foliar Volatile Involved in Multiple Interactions between Plants and Other Organisms. Molecules (Basel, Switzerland). 22: 0-0.
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Doi: 10.3390/molecules22071148

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β-Ocimene is a very common plant volatile released in important amounts from the leaves and flowers of many plant species. This acyclic monoterpene can play several biological functions in plants, by potentially affecting floral visitors and also by mediating defensive responses to herbivory. The ubiquity and high relative abundance of β-ocimene in the floral scents of species from most plant families and from different pollination syndromes (ranging from generalism to specialism) strongly suggest that this terpenoid may play an important role in the attraction of pollinators to flowers. We compiled abundant evidence from published studies that supports β-ocimene as a generalist attractant of a wide spectrum of pollinators. We found no studies testing behavioural responses of pollinators to β-ocimene, that could directly demonstrate or deny the function of β-ocimene in pollinator attraction; but several case studies support that the emissions of β-ocimene in flowers of different species follow marked temporal and spatial patterns of emission, which are typical from floral volatile organic compound (VOC) emissions that are involved in pollinator attraction. Furthermore, important β-ocimene emissions are induced from vegetative plant tissues after herbivory in many species, which have relevant functions in the establishment of tritrophic interactions. We thus conclude that β-ocimene is a key plant volatile with multiple relevant functions in plants, depending on the organ and the time of emission. Experimental behavioural studies on pure β-ocimene conducted with pollinating insects will be necessary to prove the assumptions made here.

Llegeix més

Shifts in plant foliar and floral metabolomes in response to the suppression of the associated microbiota

Gargallo-Garriga A., Sardans J., Pérez-Trujillo M., Guenther A., Llusià J., Rico L., Terradas J., Farré-Armengol G., Filella I., Parella T., Peñuelas J. (2016) Shifts in plant foliar and floral metabolomes in response to the suppression of the associated microbiota. BMC Plant Biology. 16: 0-0.
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Doi: 10.1186/s12870-016-0767-7

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Background: The phyllospheric microbiota is assumed to play a key role in the metabolism of host plants. Its role in determining the epiphytic and internal plant metabolome, however, remains to be investigated. We analyzed the Liquid Chromatography-Mass Spectrometry (LC-MS) profiles of the epiphytic and internal metabolomes of the leaves and flowers of Sambucus nigra with and without external antibiotic treatment application. Results: The epiphytic metabolism showed a degree of complexity similar to that of the plant organs. The suppression of microbial communities by topical applications of antibiotics had a greater impact on the epiphytic metabolome than on the internal metabolomes of the plant organs, although even the latter changed significantly both in leaves and flowers. The application of antibiotics decreased the concentration of lactate in both epiphytic and organ metabolomes, and the concentrations of citraconic acid, acetyl-CoA, isoleucine, and several secondary compounds such as terpenes and phenols in the epiphytic extracts. The metabolite pyrogallol appeared in the floral epiphytic community only after the treatment. The concentrations of the amino acid precursors of the ketoglutarate-synthesis pathway tended to decrease in the leaves and to increase in the foliar epiphytic extracts. Conclusions: These results suggest that anaerobic and/or facultative anaerobic bacteria were present in high numbers in the phyllosphere and in the apoplasts of S. nigra. The results also show that microbial communities play a significant role in the metabolomes of plant organs and could have more complex and frequent mutualistic, saprophytic, and/or parasitic relationships with internal plant metabolism than currently assumed. © 2016 Gargallo-Garriga et al.

Llegeix més

Vegetation baseline phenology from kilometric global LAI satellite products

Verger A., Filella I., Baret F., Peñuelas J. (2016) Vegetation baseline phenology from kilometric global LAI satellite products. Remote Sensing of Environment. 178: 1-14.
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Doi: 10.1016/j.rse.2016.02.057

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Land surface phenology derived from remotely sensed satellite data can substantially improve our macroecological knowledge and the representation of phenology in earth system models. We characterized the baseline phenology of the vegetation at the global scale from the GEOCLIM climatology of leaf area index (LAI) estimated from 1-km SPOT-VEGETATION time series for 1999-2010. The phenological metrics were calibrated over an ensemble of ground observations of the timing of leaf unfolding and autumnal colouring of leaves. The start and end of season were best identified using respectively 30% and 40% threshold of LAI amplitude values. The accuracy of the derived phenological metrics, evaluated using available ground observations for birch forests over Europe (and lilac shrubs over North America), improved as compared to those derived from MODIS-EVI and produced an overall root mean square error of 7 days (19 days) for the timing of the start of season, 15 for the end of season, and 16 for the length of season. The spatial patterns of the derived LAI phenology agreed well with those from MODIS-EVI and -NDVI, although the timing of the start, end, and length of season differed by about one month at the global scale, with higher uncertainties in areas of limited seasonality of the satellite signal and systematic biases due to the differences in the methodologies and datasets. The baseline LAI phenology was spatially consistent with the global distributions of climatic drivers and biome land cover. © 2016 Elsevier Inc.

Llegeix més

Remotely-sensed detection of effects of extreme droughts on gross primary production

Vicca S., Balzarolo M., Filella I., Granier A., Herbst M., Knohl A., Longdoz B., Mund M., Nagy Z., Pintér K., Rambal S., Verbesselt J., Verger A., Zeileis A., Zhang C., Peñuelas J. (2016) Remotely-sensed detection of effects of extreme droughts on gross primary production. Scientific Reports. 6: 0-0.
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Doi: 10.1038/srep28269

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Severe droughts strongly impact photosynthesis (GPP), and satellite imagery has yet to demonstrate its ability to detect drought effects. Especially changes in vegetation functioning when vegetation state remains unaltered (no browning or defoliation) pose a challenge to satellite-derived indicators. We evaluated the performance of different satellite indicators to detect strong drought effects on GPP in a beech forest in France (Hesse), where vegetation state remained largely unaffected while GPP decreased substantially. We compared the results with three additional sites: a Mediterranean holm oak forest (Puéchabon), a temperate beech forest (Hainich), and a semi-arid grassland (Bugacpuszta). In Hesse, a three-year reduction in GPP following drought was detected only by the Enhanced Vegetation Index (EVI). The Photochemical Reflectance Index (PRI) also detected this drought effect, but only after normalization for absorbed light. In Puéchabon normalized PRI outperformed the other indicators, while the short-term drought effect in Hainich was not detected by any tested indicator. In contrast, most indicators, but not PRI, captured the drought effects in Bugacpuszta. Hence, PRI improved detection of drought effects on GPP in forests and we propose that PRI normalized for absorbed light is considered in future algorithms to estimate GPP from space.

Llegeix més

Optimum temperature for floral terpene emissions tracks the mean temperature of the flowering season

Farre-Armengol G., Filella I., Llusia J., Niinemets U., Penuelas J. (2015) Optimum temperature for floral terpene emissions tracks the mean temperature of the flowering season. Functional Plant Biology. 42: 851-857.
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Doi: 10.1071/FP14279

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Emissions of volatiles from leaves exhibit temperature dependence on maximums, but the optimum temperatures for the release of floral volatiles and the mechanism(s) of optimising these emissions have not been determined. We hypothesised that flowers have an optimum temperature for the emission of volatiles and, because the period of flowering varies highly among species, that this optimum is adapted to the temperatures prevailing during flowering. To test these hypotheses, we characterised the temperature responses of floral terpene emissions of diverse widespread Mediterranean plant species flowering in different seasons by using dynamic headspace sampling and analysis with GC-MS. The floral emissions of terpenes across species exhibited maximums at the temperatures corresponding to the season of flowering, with the lowest optimal temperatures observed in winter-flowering and the highest in summer-flowering species. These trends were valid for emissions of both total terpenes and the various terpene compounds. The results show that the optimum temperature of floral volatile emissions scales with temperature at flowering, and suggest that this scaling is the outcome of physiological adaptations of the biosynthetic or emission mechanisms of flowers. © CSIRO 2015.

Llegeix més

Relationships among floral VOC emissions, floral rewards and visits of pollinators in five plant species of a Mediterranean shrubland

Farre-Armengol G., Filella I., Llusia J., Penuelas J. (2015) Relationships among floral VOC emissions, floral rewards and visits of pollinators in five plant species of a Mediterranean shrubland. Plant Ecology and Evolution. 148: 90-99.
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Doi: 10.5091/plecevo.2015.963

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Background and aims–In plant-pollinator communities seasonal changes in the abundance of pollinators lead to seasonal changes in competition among flowering plants for their services. Here we address the following question: Do flowers of a given species produce more olfactory signals (emissions of volatile compounds) and rewards (nectar and pollen) during the phase(s) of the flowering period within which they have to maximally compete with the signals and rewards of other co-flowering species in the community, compared to the amount of signals and rewards produced during the period(s) with less floral competition? Methods–We analysed the floral emission rates of biogenic volatile organic compounds by gas chromatography and proton transfer reaction mass spectrometry, the visitation rates of pollinators, and the availability of nectar and pollen during the flowering periods of five species to test whether floral rewards and signals would decrease with an increase in pollinator visitation rates during late spring and early summer, i.e. coinciding with decreasing competitive pressure for the services of pollinators. Key results–The results indicate that phenological patterns in the production of rewards are only present at the species level in those species with long flowering periods or with matching periods of changes in pollinator populations. The capacity of emitting isoprenoids and oxidised volatile organic compounds, however, did not present significant patterns during the flowering period in any of the five species studied. Conclusions–The results support the hypothesis of a decreasing competitive pressure for the attraction of pollinators that may drive a decrease in floral investment in rewards but not an accompanying decrease of the capacity of emitting volatile olfactory signals in a species with long flowering period. However, the negative correlation between nectar production and visitation rates may be reinforced by the opposite responses of these variables to climatic conditions. This fact makes difficult to discern possible evolutionary forces tending to decrease rewards from plastic responses to changing environmental conditions in that part of the flowering period in which pollinator visitation rates are higher. © 2015 Botanic Garden Meise and Royal Botanical Society of Belgium.

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